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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816909.1_cds_XP_016499011.1_12979
CDS Infomation

[gene=LOC107817661] [db_xref=GeneID:107817661] [protein=vacuolar protein sorting-associated protein 36-like] [protein_id=XP_016499011.1] [location=join(148..744,1139..1342,1598..1691,1876..1965,2832..2993,3059..3143,3590..3643,3753..3756)] [gbkey=CDS]
Sequence

ATGGCCGGAAATTGGCTACTCCCGGCACAGTTGACCCGGAGTGGGAGGCCGGTGCTTGAA
GCAGGTGAAGTAGAGTGCAGCCTTCTCTCCTCCGTAGACCTCCTTTCTGAAGAAAACCCA
AACTTCCCTCACCTTAAATCGGGCCTCCTCATTCTCACAACTCACCGTCTTATTTGGGTC
CAAGAATCATCCACCACCTTCCCTCCTACTGCTGTATTCATCCCTCTTTCAGCTGTCACT
CACATCTTCTCCCTCAAAAAATCCATCAAGTCAATGTTTGCAAGCCCTAGATTCCGATTT
CAGGCCTCACTTAAAGGGATGGTGGTGGTGATTACTTTGATTCTTAGGGGCAAATCGGAC
ATTGACTCGTTTTTAGAGAAGTTTTGGGAAGCATGGAGAAGGAAAGCTTGGGAAGATCGG
GTAGTAAAATCTGGGTCGGAGGCTTCGGGTTCGGGTCATGGGTCGGGTGGTGATGTAGGA
TTTGCAGTGAAGATGCCGGTTGTTGGTGTAGCTGGGATATTGAGGAAAGAGCAGGAGATG
TGGGAGAATACTGATAAGAGCTTGCAGGATGCTTTTCAGGATTTGAATGCTCTCATGGGT
AAGGCTAAAGAAATGGTGATCCTAGCTGAGAGAATGAGAACAAAGCTTCTCTCTGGCTCA
ACTAGTCAGGCCACTGGCACAAATGATGAGGAAATTGGCACCAAAGAAGAGATGCAAGAA
TTACTATTAAGTGTTGGTATTGTGTCTCCAGTTACTAAAGAATCTGCTGGTGCTTTGTAT
CATCAACAATTATCTCGGCAGTTGGCAGATTTTGTCAAAATTCCACTGGAGAGATCTGGA
GGAATGATTAATCTCATTGACATCTATTGCCTTTTCAATCGGGCTCGCGGAACAGAATTG
ATCTCGCCCGATGATTTGCTGCGTGCTTGTTCTCTCTGGGAGAAGTTTGACGTGTATGCC
TCCCCCTTTTCCCTACACACACNGTGCCCACAATTCTGCTATCAATTGCAGGTATTTACT
AGAATAAGATCTTTGGTTACTACACCGGACACTTTACGAGCAGGGATCACTGCTAGTGAT
GCTGCAATGACTCTGGGAATTGCTCCAGCTATGGCCAAAGAGCACCTTCTTGCAGCCGAG
GCCAAAGGACTTCTGTGTAGAGATGTTAGTCCAGATGGATTCCGCTTTTTCGTCAATTTG
TTGCAAGAAGTTGATGCTGATGATATATTCTTAGTGAAAGATTATGGAATCTACCATACA
TGGGTCAAAGCTATCTCTGCTGCCAGGTGA

Peptide Sequence

PEP ID

XP_016499011.1
PEP Infomation

PREDICTED: vacuolar protein sorting-associated protein 36-like [Nicotiana tabacum]
Sequence

MAGNWLLPAQLTRSGRPVLEAGEVECSLLSSVDLLSEENPNFPHLKSGLLILTTHRLIWV
QESSTTFPPTAVFIPLSAVTHIFSLKKSIKSMFASPRFRFQASLKGMVVVITLILRGKSD
IDSFLEKFWEAWRRKAWEDRVVKSGSEASGSGHGSGGDVGFAVKMPVVGVAGILRKEQEM
WENTDKSLQDAFQDLNALMGKAKEMVILAERMRTKLLSGSTSQATGTNDEEIGTKEEMQE
LLLSVGIVSPVTKESAGALYHQQLSRQLADFVKIPLERSGGMINLIDIYCLFNRARGTEL
ISPDDLLRACSLWEKFDVYASPFSLHTXCPQFCYQLQVFTRIRSLVTTPDTLRAGITASD
AAMTLGIAPAMAKEHLLAAEAKGLLCRDVSPDGFRFFVNLLQEVDADDIFLVKDYGIYHT
WVKAISAAR

Transcript Sequence

Gene sequence data has not been registered.